Generate the density plot for adjacency matrices. This function uses the raw adjacency matrix and significant adjacency matrix resulted from PCIT function.

densityPlot(mat1, mat2, threshold = 0.5)

Arguments

mat1

Raw adjacency matrix.

mat2

Significant adjacency matrix.

threshold

Threshold of correlation module to plot (default: 0.5).

Value

Returns an density plot of raw correlation with significant PCIT values.

Examples

# loading a simulated normalized data data('simNorm') # getting the PCIT results results <- PCIT(simNorm[1:20, ]) # using the PCIT results to get density distribution of correlation coefficients densityPlot(mat1 = results$adj_raw, mat2 = results$adj_sig, threshold = 0.5)